I also experience a leak on the top of the front door. When I was at the factory getting my window replaced, I mentioned it. They had the technician raise the door up. He place a jack under it, loosened some screws on the door, jacked it up, added some more screws. No more leak, even in a heavy rain. If you have it done, make sure they get the door seal straight (backside of the door).
Finally completed all State visits in August 2011 with a trip to North Dakota.