Well I feel your pain... my bunks are leaking also. I was able to see today where it is coming in on my rear bunk, but the front bunk, I'm still not quite sure. I see the sides where the windows are, the rain is soaking through, but there is also isolated puddles on the bunk. The rear bunk also shows this but the majority of the water is coming down my tent pole also.
I have been talking to my dealer and they have been very supportive and have handle this very well. I will be taking it to them in October for repair. UnfortunatleyI have one more camping trip scheduled for thanksgiving so I can't take in before then. I will just have totarp off my bunk ends for that trip.